WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.2.1 Sequence Name  C42C1.2.1
Length (nt)  2588   Chromosome Location  IV: 12264659-12268322
Chromosome . Primary Identifier  IV Chromosome Location . Start  12264659
Chromosome Location . End  12268322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016580 ppm-1.H C42C1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.2 C42C1.2 1623   IV: 12265608-12265694

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.2.1 12264659 12268322 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146942   1036   IV: 12264659-12265694 Caenorhabditis elegans
Exon146943   463   IV: 12265960-12266422 Caenorhabditis elegans
Exon146944   202   IV: 12266474-12266675 Caenorhabditis elegans
Exon146945   172   IV: 12266918-12267089 Caenorhabditis elegans
Exon146946   219   IV: 12267134-12267352 Caenorhabditis elegans
Exon146947   173   IV: 12267724-12267896 Caenorhabditis elegans
Exon146948   165   IV: 12267946-12268110 Caenorhabditis elegans
Exon146949   158   IV: 12268165-12268322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.2.1 12264659 12268322 -1

1 Sequence

Length
2588

1 Sequence Ontology Term

Identifier Name Description
transcript