WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39C12A.5.1 Sequence Name  Y39C12A.5.1
Length (nt)  1068   Chromosome Location  IV: 12234085-12236111
Chromosome . Primary Identifier  IV Chromosome Location . Start  12234085
Chromosome Location . End  12236111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39C12A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012707 sre-16 Y39C12A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39C12A.5 Y39C12A.5 1014   IV: 12234139-12234315

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39C12A.5.1 12234085 12236111 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146901   231   IV: 12234085-12234315 Caenorhabditis elegans
Exon146902   79   IV: 12234358-12234436 Caenorhabditis elegans
Exon146903   131   IV: 12234478-12234608 Caenorhabditis elegans
Exon146904   179   IV: 12234652-12234830 Caenorhabditis elegans
Exon146905   153   IV: 12235022-12235174 Caenorhabditis elegans
Exon146906   66   IV: 12235227-12235292 Caenorhabditis elegans
Exon146907   158   IV: 12235835-12235992 Caenorhabditis elegans
Exon146908   71   IV: 12236041-12236111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39C12A.5.1 12234085 12236111 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript