WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198079 Gene Name  F35G2.13
Sequence Name  ? F35G2.13 Organism  Caenorhabditis elegans
Automated Description  Is affected by Oligosaccharides based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 143
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198079

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35G2.13 F35G2.13 143   IV: 12188796-12188938
 

Other

0 CDSs

0 RNAi Result

22 Allele

Public Name
gk964278
gk964078
gk964500
gk962765
gk964475
gk964320
gk963346
WBVar02124966
gk962710
gk962687
gk963390
gk964155
gk963650
WBVar02124210
gk964328
WBVar02121623
gk964034
gk962588
gk963404
WBVar02120508
WBVar02121218
WBVar02120706

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00198079 12188796 12188938 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_12188730..12188795   66 IV: 12188730-12188795 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression after four-day-old young adult worms were placed on NGM plates seeded with OP50 in the presence 5% Agaro-oligosaccharides(AGO) for 24 h, comparing to animals grown in the absence of AGO. Fold change > 2. WBPaper00064306:Agaro-oligosaccharides_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00198079 12188796 12188938 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
143

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_12188939..12192169   3231 IV: 12188939-12192169 Caenorhabditis elegans