WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0001.3a.1 Sequence Name  B0001.3a.1
Length (nt)  1969   Chromosome Location  IV: 12143431-12145731
Chromosome . Primary Identifier  IV Chromosome Location . Start  12143431
Chromosome Location . End  12145731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007088 B0001.3 B0001.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0001.3a B0001.3a 1776   IV: 12143593-12143712

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0001.3a.1 12143431 12145731 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146663   282   IV: 12143431-12143712 Caenorhabditis elegans
Exon146665   186   IV: 12143761-12143946 Caenorhabditis elegans
Exon146668   459   IV: 12143994-12144452 Caenorhabditis elegans
Exon146671   343   IV: 12144497-12144839 Caenorhabditis elegans
Exon146676   398   IV: 12144886-12145283 Caenorhabditis elegans
Exon146679   121   IV: 12145334-12145454 Caenorhabditis elegans
Exon146683   146   IV: 12145510-12145655 Caenorhabditis elegans
Exon146685   34   IV: 12145698-12145731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0001.3a.1 12143431 12145731 -1

1 Sequence

Length
1969

1 Sequence Ontology Term

Identifier Name Description
transcript