WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E4.1.1 Sequence Name  K08E4.1.1
Length (nt)  3829   Chromosome Location  IV: 12051491-12055746
Chromosome . Primary Identifier  IV Chromosome Location . Start  12051491
Chromosome Location . End  12055746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005015 spt-5 K08E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E4.1 K08E4.1 3627   IV: 12051497-12051544

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K08E4.1.1 12051491 12055746 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146387   54   IV: 12051491-12051544 Caenorhabditis elegans
Exon146388   84   IV: 12051674-12051757 Caenorhabditis elegans
Exon146389   510   IV: 12051807-12052316 Caenorhabditis elegans
Exon146390   583   IV: 12052366-12052948 Caenorhabditis elegans
Exon146391   1653   IV: 12052995-12054647 Caenorhabditis elegans
Exon146392   393   IV: 12054699-12055091 Caenorhabditis elegans
Exon146393   206   IV: 12055147-12055352 Caenorhabditis elegans
Exon146394   346   IV: 12055401-12055746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K08E4.1.1 12051491 12055746 1

1 Sequence

Length
3829

1 Sequence Ontology Term

Identifier Name Description
transcript