WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12G3.8a.1 Sequence Name  T12G3.8a.1
Length (nt)  1070   Chromosome Location  IV: 12049850-12051215
Chromosome . Primary Identifier  IV Chromosome Location . Start  12049850
Chromosome Location . End  12051215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12G3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000270 bre-5 T12G3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12G3.8a T12G3.8a 969   IV: 12049932-12050240

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T12G3.8a.1 12049850 12051215 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146378   391   IV: 12049850-12050240 Caenorhabditis elegans
Exon146380   198   IV: 12050294-12050491 Caenorhabditis elegans
Exon146382   189   IV: 12050536-12050724 Caenorhabditis elegans
Exon146384   147   IV: 12050775-12050921 Caenorhabditis elegans
Exon146385   97   IV: 12050974-12051070 Caenorhabditis elegans
Exon146386   48   IV: 12051168-12051215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T12G3.8a.1 12049850 12051215 -1

1 Sequence

Length
1070

1 Sequence Ontology Term

Identifier Name Description
transcript