WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E6.5a.1 Sequence Name  C29E6.5a.1
Length (nt)  1670   Chromosome Location  IV: 11899660-11902910
Chromosome . Primary Identifier  IV Chromosome Location . Start  11899660
Chromosome Location . End  11902910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003633 nhr-43 C29E6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E6.5a C29E6.5a 1350   IV: 11899729-11899787

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C29E6.5a.1 11899660 11902910 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145782   128   IV: 11899660-11899787 Caenorhabditis elegans
Exon145783   130   IV: 11900323-11900452 Caenorhabditis elegans
Exon145785   94   IV: 11900901-11900994 Caenorhabditis elegans
Exon145787   72   IV: 11901063-11901134 Caenorhabditis elegans
Exon145790   250   IV: 11901516-11901765 Caenorhabditis elegans
Exon145792   405   IV: 11901817-11902221 Caenorhabditis elegans
Exon145794   268   IV: 11902270-11902537 Caenorhabditis elegans
Exon145796   323   IV: 11902588-11902910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C29E6.5a.1 11899660 11902910 1

1 Sequence

Length
1670

1 Sequence Ontology Term

Identifier Name Description
transcript