WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E6.2a.1 Sequence Name  C29E6.2a.1
Length (nt)  3740   Chromosome Location  IV: 11864532-11875732
Chromosome . Primary Identifier  IV Chromosome Location . Start  11864532
Chromosome Location . End  11875732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007801 trpa-1 C29E6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E6.2a C29E6.2a 3636   IV: 11864547-11864628

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C29E6.2a.1 11864532 11875732 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145697   97   IV: 11864532-11864628 Caenorhabditis elegans
Exon145698   412   IV: 11865069-11865480 Caenorhabditis elegans
Exon145700   979   IV: 11866041-11867019 Caenorhabditis elegans
Exon145702   94   IV: 11867094-11867187 Caenorhabditis elegans
Exon145704   87   IV: 11867235-11867321 Caenorhabditis elegans
Exon145713   166   IV: 11873251-11873416 Caenorhabditis elegans
Exon145715   312   IV: 11873469-11873780 Caenorhabditis elegans
Exon145717   454   IV: 11873979-11874432 Caenorhabditis elegans
Exon145719   408   IV: 11874498-11874905 Caenorhabditis elegans
Exon145721   471   IV: 11874956-11875426 Caenorhabditis elegans
Exon145724   260   IV: 11875473-11875732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C29E6.2a.1 11864532 11875732 1

1 Sequence

Length
3740

1 Sequence Ontology Term

Identifier Name Description
transcript