WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12F6.3a.1 Sequence Name  F12F6.3a.1
Length (nt)  1569   Chromosome Location  IV: 11578792-11583841
Chromosome . Primary Identifier  IV Chromosome Location . Start  11578792
Chromosome Location . End  11583841 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12F6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004360 rib-1 F12F6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12F6.3a F12F6.3a 1149   IV: 11578802-11578881

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F12F6.3a.1 11578792 11583841 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144946   90   IV: 11578792-11578881 Caenorhabditis elegans
Exon144947   144   IV: 11579256-11579399 Caenorhabditis elegans
Exon144948   78   IV: 11579444-11579521 Caenorhabditis elegans
Exon144949   181   IV: 11579572-11579752 Caenorhabditis elegans
Exon144950   81   IV: 11579802-11579882 Caenorhabditis elegans
Exon144952   165   IV: 11581207-11581371 Caenorhabditis elegans
Exon144953   122   IV: 11581811-11581932 Caenorhabditis elegans
Exon144954   127   IV: 11582760-11582886 Caenorhabditis elegans
Exon144955   120   IV: 11583124-11583243 Caenorhabditis elegans
Exon144958   461   IV: 11583381-11583841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F12F6.3a.1 11578792 11583841 1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
transcript