WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12F6.5a.1 Sequence Name  F12F6.5a.1
Length (nt)  3564   Chromosome Location  IV: 11570500-11578699
Chromosome . Primary Identifier  IV Chromosome Location . Start  11570500
Chromosome Location . End  11578699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12F6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006406 srgp-1 F12F6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12F6.5a F12F6.5a 3180   IV: 11570543-11570711

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F12F6.5a.1 11570500 11578699 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144922   212   IV: 11570500-11570711 Caenorhabditis elegans
Exon144927   1142   IV: 11574615-11575756 Caenorhabditis elegans
Exon144930   911   IV: 11576021-11576931 Caenorhabditis elegans
Exon144934   729   IV: 11577000-11577728 Caenorhabditis elegans
Exon144938   114   IV: 11578080-11578193 Caenorhabditis elegans
Exon144944   456   IV: 11578244-11578699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F12F6.5a.1 11570500 11578699 1

1 Sequence

Length
3564

1 Sequence Ontology Term

Identifier Name Description
transcript