WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E12.2.1 Sequence Name  F54E12.2.1
Length (nt)  3439   Chromosome Location  IV: 11333080-11336864
Chromosome . Primary Identifier  IV Chromosome Location . Start  11333080
Chromosome Location . End  11336864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010061 F54E12.2 F54E12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E12.2 F54E12.2 3276   IV: 11333242-11333398

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54E12.2.1 11333080 11336864 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144208   319   IV: 11333080-11333398 Caenorhabditis elegans
Exon144209   312   IV: 11333454-11333765 Caenorhabditis elegans
Exon144211   346   IV: 11333813-11334158 Caenorhabditis elegans
Exon144213   113   IV: 11334204-11334316 Caenorhabditis elegans
Exon144215   1002   IV: 11334367-11335368 Caenorhabditis elegans
Exon144217   725   IV: 11335425-11336149 Caenorhabditis elegans
Exon144219   552   IV: 11336200-11336751 Caenorhabditis elegans
Exon144221   70   IV: 11336795-11336864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54E12.2.1 11333080 11336864 -1

1 Sequence

Length
3439

1 Sequence Ontology Term

Identifier Name Description
transcript