WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D1.4a.1 Sequence Name  F54D1.4a.1
Length (nt)  1719   Chromosome Location  IV: 11266265-11268855
Chromosome . Primary Identifier  IV Chromosome Location . Start  11266265
Chromosome Location . End  11268855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003606 nhr-7 F54D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D1.4a F54D1.4a 1611   IV: 11266295-11266867

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54D1.4a.1 11266265 11268855 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144020   603   IV: 11266265-11266867 Caenorhabditis elegans
Exon144023   161   IV: 11267114-11267274 Caenorhabditis elegans
Exon144026   113   IV: 11267321-11267433 Caenorhabditis elegans
Exon144029   119   IV: 11267481-11267599 Caenorhabditis elegans
Exon144032   410   IV: 11267700-11268109 Caenorhabditis elegans
Exon144035   66   IV: 11268165-11268230 Caenorhabditis elegans
Exon144038   115   IV: 11268281-11268395 Caenorhabditis elegans
Exon144041   132   IV: 11268724-11268855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54D1.4a.1 11266265 11268855 -1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
transcript