Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y69E1A.10 | Y69E1A.10 |
224
 |
IV: 10973725-10973948 |
Other
9 Allele
| Public Name |
|---|
| gk964278 |
| gk964078 |
| gk964500 |
| gk962765 |
| gk963382 |
| gk964044 |
| gk959548 |
| gk211810 |
| WBVar01857649 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00196758 | 10973725 | 10973948 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_10973350..10973724 | 375 | IV: 10973350-10973724 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_downregulated |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_normal | |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 after UV irradiation, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_UV |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_10973949..10976008 | 2060 | IV: 10973949-10976008 | Caenorhabditis elegans |
