WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199277 Gene Name  R13.8
Sequence Name  ? R13.8 Organism  Caenorhabditis elegans
Automated Description  Is affected by pmt-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 136
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199277

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13.8 R13.8 136   IV: 10828161-10828296
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk964278
gk964078
gk964500
gk962765
gk963382
tm12695
gk211510
gk963106

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199277 10828161 10828296 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_10828297..10829548   1252 IV: 10828297-10829548 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector. Fold-change > 1.5, ANOVA P values < 0.05. WBPaper00055482:pmt-2(RNAi)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199277 10828161 10828296 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
136

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_10828150..10828160   11 IV: 10828150-10828160 Caenorhabditis elegans