WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04D7.4b.1 Sequence Name  K04D7.4b.1
Length (nt)  3342   Chromosome Location  IV: 10183950-10193365
Chromosome . Primary Identifier  IV Chromosome Location . Start  10183950
Chromosome Location . End  10193365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04D7.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010558 ptrg-1 K04D7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.4b K04D7.4b 3342   IV: 10183950-10184009

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K04D7.4b.1 10183950 10193365 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140393   60   IV: 10183950-10184009 Caenorhabditis elegans
Exon140395   134   IV: 10184060-10184193 Caenorhabditis elegans
Exon140397   469   IV: 10184384-10184852 Caenorhabditis elegans
Exon140399   147   IV: 10184904-10185050 Caenorhabditis elegans
Exon140401   136   IV: 10185103-10185238 Caenorhabditis elegans
Exon140403   281   IV: 10185289-10185569 Caenorhabditis elegans
Exon140405   135   IV: 10185613-10185747 Caenorhabditis elegans
Exon140407   272   IV: 10185867-10186138 Caenorhabditis elegans
Exon140409   237   IV: 10186190-10186426 Caenorhabditis elegans
Exon140411   130   IV: 10186473-10186602 Caenorhabditis elegans
Exon140413   79   IV: 10186652-10186730 Caenorhabditis elegans
Exon140415   181   IV: 10186775-10186955 Caenorhabditis elegans
Exon140417   94   IV: 10187282-10187375 Caenorhabditis elegans
Exon140419   568   IV: 10187423-10187990 Caenorhabditis elegans
Exon140421   145   IV: 10188040-10188184 Caenorhabditis elegans
Exon140425   190   IV: 10190113-10190302 Caenorhabditis elegans
Exon140429   84   IV: 10193282-10193365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K04D7.4b.1 10183950 10193365 -1

1 Sequence

Length
3342

1 Sequence Ontology Term

Identifier Name Description
transcript