WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E12.3a.1 Sequence Name  C47E12.3a.1
Length (nt)  1882   Chromosome Location  IV: 9999164-10001846
Chromosome . Primary Identifier  IV Chromosome Location . Start  9999164
Chromosome Location . End  10001846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008148 C47E12.3 C47E12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.3a C47E12.3a 1707   IV: 9999307-9999519

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.3a.1 9999164 10001846 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139712   356   IV: 9999164-9999519 Caenorhabditis elegans
Exon139713   426   IV: 9999575-10000000 Caenorhabditis elegans
Exon139715   275   IV: 10000045-10000319 Caenorhabditis elegans
Exon139717   453   IV: 10000372-10000824 Caenorhabditis elegans
Exon139719   80   IV: 10001342-10001421 Caenorhabditis elegans
Exon139721   137   IV: 10001465-10001601 Caenorhabditis elegans
Exon139723   120   IV: 10001644-10001763 Caenorhabditis elegans
Exon139725   35   IV: 10001812-10001846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.3a.1 9999164 10001846 -1

1 Sequence

Length
1882

1 Sequence Ontology Term

Identifier Name Description
transcript