WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E12.4c.1 Sequence Name  C47E12.4c.1
Length (nt)  1623   Chromosome Location  IV: 9995385-9997963
Chromosome . Primary Identifier  IV Chromosome Location . Start  9995385
Chromosome Location . End  9997963 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008149 pyp-1 C47E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.4c C47E12.4c 1284   IV: 9995724-9995859

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.4c.1 9995385 9997963 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139696   475   IV: 9995385-9995859 Caenorhabditis elegans
Exon139700   167   IV: 9995904-9996070 Caenorhabditis elegans
Exon139703   491   IV: 9996123-9996613 Caenorhabditis elegans
Exon139707   131   IV: 9996661-9996791 Caenorhabditis elegans
Exon139708   152   IV: 9997559-9997710 Caenorhabditis elegans
Exon139709   207   IV: 9997757-9997963 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.4c.1 9995385 9997963 -1

1 Sequence

Length
1623

1 Sequence Ontology Term

Identifier Name Description
transcript