WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E12.5c.1 Sequence Name  C47E12.5c.1
Length (nt)  3339   Chromosome Location  IV: 9989932-9994923
Chromosome . Primary Identifier  IV Chromosome Location . Start  9989932
Chromosome Location . End  9994923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006699 uba-1 C47E12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.5c C47E12.5c 3339   IV: 9989932-9990064

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.5c.1 9989932 9994923 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139658   133   IV: 9989932-9990064 Caenorhabditis elegans
Exon139665   305   IV: 9990140-9990444 Caenorhabditis elegans
Exon139671   1182   IV: 9990501-9991682 Caenorhabditis elegans
Exon139677   1083   IV: 9991729-9992811 Caenorhabditis elegans
Exon139683   304   IV: 9992859-9993162 Caenorhabditis elegans
Exon139685   137   IV: 9993210-9993346 Caenorhabditis elegans
Exon139692   195   IV: 9994729-9994923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.5c.1 9989932 9994923 -1

1 Sequence

Length
3339

1 Sequence Ontology Term

Identifier Name Description
transcript