WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E12.5a.1 Sequence Name  C47E12.5a.1
Length (nt)  3623   Chromosome Location  IV: 9989673-9994945
Chromosome . Primary Identifier  IV Chromosome Location . Start  9989673
Chromosome Location . End  9994945 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006699 uba-1 C47E12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.5a C47E12.5a 3342   IV: 9989932-9990064

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.5a.1 9989673 9994945 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139656   392   IV: 9989673-9990064 Caenorhabditis elegans
Exon139660   305   IV: 9990140-9990444 Caenorhabditis elegans
Exon139666   1182   IV: 9990501-9991682 Caenorhabditis elegans
Exon139672   1083   IV: 9991729-9992811 Caenorhabditis elegans
Exon139678   304   IV: 9992859-9993162 Caenorhabditis elegans
Exon139686   140   IV: 9993210-9993349 Caenorhabditis elegans
Exon139693   217   IV: 9994729-9994945 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.5a.1 9989673 9994945 -1

1 Sequence

Length
3623

1 Sequence Ontology Term

Identifier Name Description
transcript