WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E12.11a.1 Sequence Name  C47E12.11a.1
Length (nt)  1230   Chromosome Location  IV: 9969400-9971258
Chromosome . Primary Identifier  IV Chromosome Location . Start  9969400
Chromosome Location . End  9971258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008154 C47E12.11 C47E12.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.11a C47E12.11a 1101   IV: 9969897-9970366

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.11a.1 9969400 9971258 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139591   40   IV: 9969400-9969439 Caenorhabditis elegans
Exon139592   501   IV: 9969866-9970366 Caenorhabditis elegans
Exon139594   96   IV: 9970421-9970516 Caenorhabditis elegans
Exon139596   106   IV: 9970561-9970666 Caenorhabditis elegans
Exon139598   326   IV: 9970725-9971050 Caenorhabditis elegans
Exon139601   161   IV: 9971098-9971258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E12.11a.1 9969400 9971258 1

1 Sequence

Length
1230

1 Sequence Ontology Term

Identifier Name Description
transcript