Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:K07F5.20 | K07F5.20 |
114
 |
IV: 9874628-9874741 |
Other
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00200908 | 9874628 | 9874741 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_9866150..9874627 | 8478 | IV: 9866150-9874627 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector. | Fold-change > 1.5, ANOVA P values < 0.05. | WBPaper00055482:pmt-2(RNAi)_upregulated | |
| Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_downregulated_neuron | |
| Most down-regulated genes after Cit-SPIONs exposure (p<0.01). | Past 3.03 was used for all statistical analyses. Statistical significance between two groups was assessed by t tests. A gene is determined to be differentially expressed when p < 0.01 and only 75 genes were selected as differentially regulated for each expression cluster. | WBPaper00051437:Cit-SPIONs_downregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_9874742..9875695 | 954 | IV: 9874742-9875695 | Caenorhabditis elegans |
