WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07F5.13c.1 Sequence Name  K07F5.13c.1
Length (nt)  2290   Chromosome Location  IV: 9858488-9862111
Chromosome . Primary Identifier  IV Chromosome Location . Start  9858488
Chromosome Location . End  9862111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07F5.13c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003787 npp-1 K07F5.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07F5.13c K07F5.13c 1920   IV: 9858492-9858589

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K07F5.13c.1 9858488 9862111 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138927   102   IV: 9858488-9858589 Caenorhabditis elegans
Exon138931   104   IV: 9858638-9858741 Caenorhabditis elegans
Exon138933   105   IV: 9858822-9858926 Caenorhabditis elegans
Exon138935   270   IV: 9859598-9859867 Caenorhabditis elegans
Exon138938   182   IV: 9860106-9860287 Caenorhabditis elegans
Exon138941   180   IV: 9860344-9860523 Caenorhabditis elegans
Exon138944   394   IV: 9860574-9860967 Caenorhabditis elegans
Exon138947   179   IV: 9861062-9861240 Caenorhabditis elegans
Exon138950   198   IV: 9861291-9861488 Caenorhabditis elegans
Exon138951   576   IV: 9861536-9862111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K07F5.13c.1 9858488 9862111 1

1 Sequence

Length
2290

1 Sequence Ontology Term

Identifier Name Description
transcript