WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08D2.5a.1 Sequence Name  W08D2.5a.1
Length (nt)  4102   Chromosome Location  IV: 9817412-9824580
Chromosome . Primary Identifier  IV Chromosome Location . Start  9817412
Chromosome Location . End  9824580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012341 catp-6 W08D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08D2.5a W08D2.5a 3804   IV: 9817710-9817842

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W08D2.5a.1 9817412 9824580 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138803   431   IV: 9817412-9817842 Caenorhabditis elegans
Exon138806   180   IV: 9817898-9818077 Caenorhabditis elegans
Exon138809   179   IV: 9818121-9818299 Caenorhabditis elegans
Exon138812   387   IV: 9818779-9819165 Caenorhabditis elegans
Exon138815   212   IV: 9819212-9819423 Caenorhabditis elegans
Exon138818   388   IV: 9819468-9819855 Caenorhabditis elegans
Exon138821   163   IV: 9819903-9820065 Caenorhabditis elegans
Exon138824   194   IV: 9820110-9820303 Caenorhabditis elegans
Exon138827   331   IV: 9820350-9820680 Caenorhabditis elegans
Exon138830   221   IV: 9820729-9820949 Caenorhabditis elegans
Exon138833   104   IV: 9820996-9821099 Caenorhabditis elegans
Exon138836   142   IV: 9821157-9821298 Caenorhabditis elegans
Exon138840   105   IV: 9821346-9821450 Caenorhabditis elegans
Exon138847   120   IV: 9823096-9823215 Caenorhabditis elegans
Exon138849   129   IV: 9823267-9823395 Caenorhabditis elegans
Exon138851   79   IV: 9823441-9823519 Caenorhabditis elegans
Exon138853   111   IV: 9823568-9823678 Caenorhabditis elegans
Exon138855   344   IV: 9823726-9824069 Caenorhabditis elegans
Exon138857   52   IV: 9824134-9824185 Caenorhabditis elegans
Exon138860   131   IV: 9824229-9824359 Caenorhabditis elegans
Exon138861   99   IV: 9824482-9824580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W08D2.5a.1 9817412 9824580 -1

1 Sequence

Length
4102

1 Sequence Ontology Term

Identifier Name Description
transcript