WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08D2.1.1 Sequence Name  W08D2.1.1
Length (nt)  1950   Chromosome Location  IV: 9812420-9815526
Chromosome . Primary Identifier  IV Chromosome Location . Start  9812420
Chromosome Location . End  9815526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08D2.1 W08D2.1 1182   IV: 9813183-9813278

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W08D2.1.1 9812420 9815526 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138772   859   IV: 9812420-9813278 Caenorhabditis elegans
Exon138775   101   IV: 9813605-9813705 Caenorhabditis elegans
Exon138778   127   IV: 9813765-9813891 Caenorhabditis elegans
Exon138781   144   IV: 9814011-9814154 Caenorhabditis elegans
Exon138784   171   IV: 9814201-9814371 Caenorhabditis elegans
Exon138787   140   IV: 9814421-9814560 Caenorhabditis elegans
Exon138790   83   IV: 9814960-9815042 Caenorhabditis elegans
Exon138793   80   IV: 9815101-9815180 Caenorhabditis elegans
Exon138796   133   IV: 9815234-9815366 Caenorhabditis elegans
Exon138799   112   IV: 9815415-9815526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W08D2.1.1 9812420 9815526 -1

1 Sequence

Length
1950

1 Sequence Ontology Term

Identifier Name Description
transcript