WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28D4.2c.1 Sequence Name  C28D4.2c.1
Length (nt)  1636   Chromosome Location  IV: 9731740-9733930
Chromosome . Primary Identifier  IV Chromosome Location . Start  9731740
Chromosome Location . End  9733930 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28D4.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000509 cka-1 C28D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28D4.2c C28D4.2c 1356   IV: 9732018-9732269

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C28D4.2c.1 9731740 9733930 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138544   530   IV: 9731740-9732269 Caenorhabditis elegans
Exon138547   148   IV: 9732326-9732473 Caenorhabditis elegans
Exon138550   131   IV: 9732522-9732652 Caenorhabditis elegans
Exon138553   117   IV: 9732784-9732900 Caenorhabditis elegans
Exon138556   67   IV: 9732947-9733013 Caenorhabditis elegans
Exon138559   111   IV: 9733067-9733177 Caenorhabditis elegans
Exon138562   103   IV: 9733223-9733325 Caenorhabditis elegans
Exon138565   152   IV: 9733410-9733561 Caenorhabditis elegans
Exon138568   137   IV: 9733609-9733745 Caenorhabditis elegans
Exon138571   140   IV: 9733791-9733930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C28D4.2c.1 9731740 9733930 -1

1 Sequence

Length
1636

1 Sequence Ontology Term

Identifier Name Description
transcript