WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28D4.1.2 Sequence Name  C28D4.1.2
Length (nt)  1604   Chromosome Location  IV: 9728681-9731301
Chromosome . Primary Identifier  IV Chromosome Location . Start  9728681
Chromosome Location . End  9731301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28D4.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003690 nhr-100 C28D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28D4.1 C28D4.1 1314   IV: 9728685-9728836

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C28D4.1.2 9728681 9731301 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138527   156   IV: 9728681-9728836 Caenorhabditis elegans
Exon138529   125   IV: 9728887-9729011 Caenorhabditis elegans
Exon138531   179   IV: 9729060-9729238 Caenorhabditis elegans
Exon138533   114   IV: 9729456-9729569 Caenorhabditis elegans
Exon138535   114   IV: 9729625-9729738 Caenorhabditis elegans
Exon138537   167   IV: 9729843-9730009 Caenorhabditis elegans
Exon138539   280   IV: 9730509-9730788 Caenorhabditis elegans
Exon138541   469   IV: 9730833-9731301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C28D4.1.2 9728681 9731301 1

1 Sequence

Length
1604

1 Sequence Ontology Term

Identifier Name Description
transcript