WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.5c.2 Sequence Name  F58G6.5c.2
Length (nt)  2285   Chromosome Location  IV: 9664360-9675671
Chromosome . Primary Identifier  IV Chromosome Location . Start  9664360
Chromosome Location . End  9675671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.5c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003627 nhr-34 F58G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.5c F58G6.5c 1896   IV: 9664684-9664794

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58G6.5c.2 9664360 9675671 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138350   435   IV: 9664360-9664794 Caenorhabditis elegans
Exon138358   138   IV: 9664946-9665083 Caenorhabditis elegans
Exon138363   161   IV: 9665130-9665290 Caenorhabditis elegans
Exon138368   214   IV: 9665423-9665636 Caenorhabditis elegans
Exon138373   189   IV: 9665684-9665872 Caenorhabditis elegans
Exon138378   333   IV: 9666033-9666365 Caenorhabditis elegans
Exon138383   217   IV: 9666465-9666681 Caenorhabditis elegans
Exon138388   100   IV: 9666770-9666869 Caenorhabditis elegans
Exon138394   216   IV: 9668861-9669076 Caenorhabditis elegans
Exon138399   122   IV: 9669183-9669304 Caenorhabditis elegans
Exon138402   104   IV: 9672567-9672670 Caenorhabditis elegans
Exon138405   56   IV: 9675616-9675671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58G6.5c.2 9664360 9675671 -1

1 Sequence

Length
2285

1 Sequence Ontology Term

Identifier Name Description
transcript