WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.1.2 Sequence Name  F58G6.1.2
Length (nt)  1780   Chromosome Location  IV: 9644299-9647697
Chromosome . Primary Identifier  IV Chromosome Location . Start  9644299
Chromosome Location . End  9647697 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010272 amph-1 F58G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.1 F58G6.1 1386   IV: 9644687-9645001

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.1.2 9644299 9647697 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138240   703   IV: 9644299-9645001 Caenorhabditis elegans
Exon138242   66   IV: 9645345-9645410 Caenorhabditis elegans
Exon138244   99   IV: 9645494-9645592 Caenorhabditis elegans
Exon138246   93   IV: 9645877-9645969 Caenorhabditis elegans
Exon138248   156   IV: 9646019-9646174 Caenorhabditis elegans
Exon138250   99   IV: 9646556-9646654 Caenorhabditis elegans
Exon138252   87   IV: 9646703-9646789 Caenorhabditis elegans
Exon138254   81   IV: 9646946-9647026 Caenorhabditis elegans
Exon138256   102   IV: 9647075-9647176 Caenorhabditis elegans
Exon138258   117   IV: 9647224-9647340 Caenorhabditis elegans
Exon138260   114   IV: 9647476-9647589 Caenorhabditis elegans
Exon138262   63   IV: 9647635-9647697 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.1.2 9644299 9647697 -1

1 Sequence

Length
1780

1 Sequence Ontology Term

Identifier Name Description
transcript