WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09C2.3c.1 Sequence Name  W09C2.3c.1
Length (nt)  4451   Chromosome Location  IV: 9625909-9631734
Chromosome . Primary Identifier  IV Chromosome Location . Start  9625909
Chromosome Location . End  9631734 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09C2.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003151 mca-1 W09C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09C2.3c W09C2.3c 3750   IV: 9626523-9626582

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W09C2.3c.1 9625909 9631734 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138178   674   IV: 9625909-9626582 Caenorhabditis elegans
Exon138184   131   IV: 9626631-9626761 Caenorhabditis elegans
Exon138188   142   IV: 9626816-9626957 Caenorhabditis elegans
Exon138192   1392   IV: 9627005-9628396 Caenorhabditis elegans
Exon138197   1236   IV: 9628746-9629981 Caenorhabditis elegans
Exon138201   156   IV: 9630037-9630192 Caenorhabditis elegans
Exon138206   282   IV: 9630237-9630518 Caenorhabditis elegans
Exon138209   177   IV: 9630614-9630790 Caenorhabditis elegans
Exon138212   78   IV: 9631241-9631318 Caenorhabditis elegans
Exon138213   183   IV: 9631552-9631734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W09C2.3c.1 9625909 9631734 -1

1 Sequence

Length
4451

1 Sequence Ontology Term

Identifier Name Description
transcript