WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27C8.1.1 Sequence Name  F27C8.1.1
Length (nt)  1739   Chromosome Location  IV: 9599178-9601695
Chromosome . Primary Identifier  IV Chromosome Location . Start  9599178
Chromosome Location . End  9601695 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27C8.1 F27C8.1 1482   IV: 9599434-9599495

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F27C8.1.1 9599178 9601695 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138120   318   IV: 9599178-9599495 Caenorhabditis elegans
Exon138121   93   IV: 9599561-9599653 Caenorhabditis elegans
Exon138122   172   IV: 9599702-9599873 Caenorhabditis elegans
Exon138123   391   IV: 9600002-9600392 Caenorhabditis elegans
Exon138125   154   IV: 9600627-9600780 Caenorhabditis elegans
Exon138126   126   IV: 9600828-9600953 Caenorhabditis elegans
Exon138127   306   IV: 9601040-9601345 Caenorhabditis elegans
Exon138128   179   IV: 9601517-9601695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F27C8.1.1 9599178 9601695 -1

1 Sequence

Length
1739

1 Sequence Ontology Term

Identifier Name Description
transcript