WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A1.1c.1 Sequence Name  T05A1.1c.1
Length (nt)  1239   Chromosome Location  IV: 9569061-9576471
Chromosome . Primary Identifier  IV Chromosome Location . Start  9569061
Chromosome Location . End  9576471 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A1.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003808 npr-2 T05A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A1.1c T05A1.1c 1239   IV: 9569061-9569102

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A1.1c.1 9569061 9576471 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138052   42   IV: 9569061-9569102 Caenorhabditis elegans
Exon138056   142   IV: 9569265-9569406 Caenorhabditis elegans
Exon138060   140   IV: 9569624-9569763 Caenorhabditis elegans
Exon138064   87   IV: 9569920-9570006 Caenorhabditis elegans
Exon138068   97   IV: 9570465-9570561 Caenorhabditis elegans
Exon138072   338   IV: 9570612-9570949 Caenorhabditis elegans
Exon138076   175   IV: 9571555-9571729 Caenorhabditis elegans
Exon138080   143   IV: 9571807-9571949 Caenorhabditis elegans
Exon138081   75   IV: 9576397-9576471 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A1.1c.1 9569061 9576471 -1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript