WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A1.1a.1 Sequence Name  T05A1.1a.1
Length (nt)  1595   Chromosome Location  IV: 9568828-9580121
Chromosome . Primary Identifier  IV Chromosome Location . Start  9568828
Chromosome Location . End  9580121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003808 npr-2 T05A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A1.1a T05A1.1a 1293   IV: 9569061-9569102

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A1.1a.1 9568828 9580121 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138049   275   IV: 9568828-9569102 Caenorhabditis elegans
Exon138053   142   IV: 9569265-9569406 Caenorhabditis elegans
Exon138057   140   IV: 9569624-9569763 Caenorhabditis elegans
Exon138061   87   IV: 9569920-9570006 Caenorhabditis elegans
Exon138065   97   IV: 9570465-9570561 Caenorhabditis elegans
Exon138069   338   IV: 9570612-9570949 Caenorhabditis elegans
Exon138073   175   IV: 9571555-9571729 Caenorhabditis elegans
Exon138077   143   IV: 9571807-9571949 Caenorhabditis elegans
Exon138082   87   IV: 9576397-9576483 Caenorhabditis elegans
Exon138084   111   IV: 9580011-9580121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A1.1a.1 9568828 9580121 -1

1 Sequence

Length
1595

1 Sequence Ontology Term

Identifier Name Description
transcript