WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A1.5a.1 Sequence Name  T05A1.5a.1
Length (nt)  1792   Chromosome Location  IV: 9547145-9560407
Chromosome . Primary Identifier  IV Chromosome Location . Start  9547145
Chromosome Location . End  9560407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A1.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011456 T05A1.5 T05A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A1.5a T05A1.5a 1080   IV: 9547266-9547338

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A1.5a.1 9547145 9560407 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137997   194   IV: 9547145-9547338 Caenorhabditis elegans
Exon137998   160   IV: 9547437-9547596 Caenorhabditis elegans
Exon138000   145   IV: 9547653-9547797 Caenorhabditis elegans
Exon138002   104   IV: 9547859-9547962 Caenorhabditis elegans
Exon138004   127   IV: 9548015-9548141 Caenorhabditis elegans
Exon138011   200   IV: 9559078-9559277 Caenorhabditis elegans
Exon138013   608   IV: 9559391-9559998 Caenorhabditis elegans
Exon138016   73   IV: 9560103-9560175 Caenorhabditis elegans
Exon138018   181   IV: 9560227-9560407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A1.5a.1 9547145 9560407 1

1 Sequence

Length
1792

1 Sequence Ontology Term

Identifier Name Description
transcript