WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C12.5.1 Sequence Name  F49C12.5.1
Length (nt)  1550   Chromosome Location  IV: 9304917-9307165
Chromosome . Primary Identifier  IV Chromosome Location . Start  9304917
Chromosome Location . End  9307165 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009875 gtnt-30 F49C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C12.5 F49C12.5 1524   IV: 9304943-9305040

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49C12.5.1 9304917 9307165 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136893   124   IV: 9304917-9305040 Caenorhabditis elegans
Exon136894   81   IV: 9305209-9305289 Caenorhabditis elegans
Exon136895   147   IV: 9305336-9305482 Caenorhabditis elegans
Exon136896   106   IV: 9305527-9305632 Caenorhabditis elegans
Exon136898   113   IV: 9305694-9305806 Caenorhabditis elegans
Exon136899   79   IV: 9305856-9305934 Caenorhabditis elegans
Exon136900   132   IV: 9305992-9306123 Caenorhabditis elegans
Exon136901   216   IV: 9306171-9306386 Caenorhabditis elegans
Exon136902   138   IV: 9306566-9306703 Caenorhabditis elegans
Exon136903   414   IV: 9306752-9307165 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49C12.5.1 9304917 9307165 1

1 Sequence

Length
1550

1 Sequence Ontology Term

Identifier Name Description
transcript