WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y11D7A.3a.1 Sequence Name  Y11D7A.3a.1
Length (nt)  1622   Chromosome Location  IV: 9236978-9241387
Chromosome . Primary Identifier  IV Chromosome Location . Start  9236978
Chromosome Location . End  9241387 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y11D7A.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012428 Y11D7A.3 Y11D7A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y11D7A.3a Y11D7A.3a 1428   IV: 9237001-9237056

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y11D7A.3a.1 9236978 9241387 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136733   79   IV: 9236978-9237056 Caenorhabditis elegans
Exon136735   177   IV: 9237240-9237416 Caenorhabditis elegans
Exon136738   188   IV: 9237466-9237653 Caenorhabditis elegans
Exon136741   190   IV: 9237718-9237907 Caenorhabditis elegans
Exon136744   131   IV: 9238057-9238187 Caenorhabditis elegans
Exon136747   189   IV: 9238238-9238426 Caenorhabditis elegans
Exon136750   172   IV: 9239105-9239276 Caenorhabditis elegans
Exon136753   136   IV: 9239692-9239827 Caenorhabditis elegans
Exon136757   360   IV: 9241028-9241387 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y11D7A.3a.1 9236978 9241387 1

1 Sequence

Length
1622

1 Sequence Ontology Term

Identifier Name Description
transcript