WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53D6.4a.1 Sequence Name  C53D6.4a.1
Length (nt)  1081   Chromosome Location  IV: 9019176-9020940
Chromosome . Primary Identifier  IV Chromosome Location . Start  9019176
Chromosome Location . End  9020940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008281 txdc-15 C53D6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D6.4a C53D6.4a 978   IV: 9019274-9019476

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53D6.4a.1 9019176 9020940 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135952   301   IV: 9019176-9019476 Caenorhabditis elegans
Exon135954   78   IV: 9019527-9019604 Caenorhabditis elegans
Exon135956   221   IV: 9019654-9019874 Caenorhabditis elegans
Exon135958   117   IV: 9020253-9020369 Caenorhabditis elegans
Exon135961   94   IV: 9020419-9020512 Caenorhabditis elegans
Exon135962   101   IV: 9020560-9020660 Caenorhabditis elegans
Exon135963   169   IV: 9020772-9020940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53D6.4a.1 9019176 9020940 -1

1 Sequence

Length
1081

1 Sequence Ontology Term

Identifier Name Description
transcript