WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B4.7e.1 Sequence Name  C53B4.7e.1
Length (nt)  1331   Chromosome Location  IV: 8987436-8990274
Chromosome . Primary Identifier  IV Chromosome Location . Start  8987436
Chromosome Location . End  8990274 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.7e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.7e C53B4.7e 1185   IV: 8987634-8987690

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.7e.1 8987436 8990274 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135874   125   IV: 8987436-8987560 Caenorhabditis elegans
Exon135875   78   IV: 8987613-8987690 Caenorhabditis elegans
Exon135881   111   IV: 8988770-8988880 Caenorhabditis elegans
Exon135887   213   IV: 8988931-8989143 Caenorhabditis elegans
Exon135892   331   IV: 8989287-8989617 Caenorhabditis elegans
Exon135897   410   IV: 8989689-8990098 Caenorhabditis elegans
Exon135899   63   IV: 8990212-8990274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.7e.1 8987436 8990274 1

1 Sequence

Length
1331

1 Sequence Ontology Term

Identifier Name Description
transcript