WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B4.4f.1 Sequence Name  C53B4.4f.1
Length (nt)  3795   Chromosome Location  IV: 8975637-8983998
Chromosome . Primary Identifier  IV Chromosome Location . Start  8975637
Chromosome Location . End  8983998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008274 pdzd-8 C53B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.4f C53B4.4f 3795   IV: 8975637-8975681

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4f.1 8975637 8983998 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135673   45   IV: 8975637-8975681 Caenorhabditis elegans
Exon135681   230   IV: 8975797-8976026 Caenorhabditis elegans
Exon135692   175   IV: 8976113-8976287 Caenorhabditis elegans
Exon135703   198   IV: 8976396-8976593 Caenorhabditis elegans
Exon135714   160   IV: 8976638-8976797 Caenorhabditis elegans
Exon135725   468   IV: 8977056-8977523 Caenorhabditis elegans
Exon135744   102   IV: 8978586-8978687 Caenorhabditis elegans
Exon135756   347   IV: 8980361-8980707 Caenorhabditis elegans
Exon135767   480   IV: 8980879-8981358 Caenorhabditis elegans
Exon135782   383   IV: 8981701-8982083 Caenorhabditis elegans
Exon135789   248   IV: 8982146-8982393 Caenorhabditis elegans
Exon135800   306   IV: 8982748-8983053 Caenorhabditis elegans
Exon135811   109   IV: 8983108-8983216 Caenorhabditis elegans
Exon135822   160   IV: 8983263-8983422 Caenorhabditis elegans
Exon135833   178   IV: 8983470-8983647 Caenorhabditis elegans
Exon135841   155   IV: 8983694-8983848 Caenorhabditis elegans
Exon135851   51   IV: 8983948-8983998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4f.1 8975637 8983998 1

1 Sequence

Length
3795

1 Sequence Ontology Term

Identifier Name Description
transcript