WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B4.4a.1 Sequence Name  C53B4.4a.1
Length (nt)  4641   Chromosome Location  IV: 8975532-8984578
Chromosome . Primary Identifier  IV Chromosome Location . Start  8975532
Chromosome Location . End  8984578 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008274 pdzd-8 C53B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.4a C53B4.4a 4083   IV: 8975637-8975681

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4a.1 8975532 8984578 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135671   150   IV: 8975532-8975681 Caenorhabditis elegans
Exon135677   230   IV: 8975797-8976026 Caenorhabditis elegans
Exon135688   175   IV: 8976113-8976287 Caenorhabditis elegans
Exon135699   198   IV: 8976396-8976593 Caenorhabditis elegans
Exon135710   160   IV: 8976638-8976797 Caenorhabditis elegans
Exon135721   468   IV: 8977056-8977523 Caenorhabditis elegans
Exon135732   177   IV: 8977730-8977906 Caenorhabditis elegans
Exon135740   102   IV: 8978586-8978687 Caenorhabditis elegans
Exon135752   347   IV: 8980361-8980707 Caenorhabditis elegans
Exon135763   480   IV: 8980879-8981358 Caenorhabditis elegans
Exon135779   383   IV: 8981701-8982083 Caenorhabditis elegans
Exon135785   248   IV: 8982146-8982393 Caenorhabditis elegans
Exon135796   306   IV: 8982748-8983053 Caenorhabditis elegans
Exon135807   109   IV: 8983108-8983216 Caenorhabditis elegans
Exon135818   160   IV: 8983263-8983422 Caenorhabditis elegans
Exon135829   178   IV: 8983470-8983647 Caenorhabditis elegans
Exon135845   146   IV: 8983703-8983848 Caenorhabditis elegans
Exon135861   624   IV: 8983955-8984578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4a.1 8975532 8984578 1

1 Sequence

Length
4641

1 Sequence Ontology Term

Identifier Name Description
transcript