WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B4.4k.1 Sequence Name  C53B4.4k.1
Length (nt)  4659   Chromosome Location  IV: 8975526-8984575
Chromosome . Primary Identifier  IV Chromosome Location . Start  8975526
Chromosome Location . End  8984575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.4k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008274 pdzd-8 C53B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.4k C53B4.4k 4098   IV: 8975637-8975681

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4k.1 8975526 8984575 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135669   156   IV: 8975526-8975681 Caenorhabditis elegans
Exon135686   230   IV: 8975797-8976026 Caenorhabditis elegans
Exon135697   175   IV: 8976113-8976287 Caenorhabditis elegans
Exon135708   198   IV: 8976396-8976593 Caenorhabditis elegans
Exon135719   160   IV: 8976638-8976797 Caenorhabditis elegans
Exon135730   468   IV: 8977056-8977523 Caenorhabditis elegans
Exon135738   177   IV: 8977730-8977906 Caenorhabditis elegans
Exon135749   102   IV: 8978586-8978687 Caenorhabditis elegans
Exon135761   347   IV: 8980361-8980707 Caenorhabditis elegans
Exon135772   480   IV: 8980879-8981358 Caenorhabditis elegans
Exon135778   389   IV: 8981695-8982083 Caenorhabditis elegans
Exon135794   248   IV: 8982146-8982393 Caenorhabditis elegans
Exon135805   306   IV: 8982748-8983053 Caenorhabditis elegans
Exon135816   109   IV: 8983108-8983216 Caenorhabditis elegans
Exon135827   160   IV: 8983263-8983422 Caenorhabditis elegans
Exon135838   178   IV: 8983470-8983647 Caenorhabditis elegans
Exon135843   155   IV: 8983694-8983848 Caenorhabditis elegans
Exon135860   621   IV: 8983955-8984575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4k.1 8975526 8984575 1

1 Sequence

Length
4659

1 Sequence Ontology Term

Identifier Name Description
transcript