WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B4.4e.1 Sequence Name  C53B4.4e.1
Length (nt)  4664   Chromosome Location  IV: 8975526-8984579
Chromosome . Primary Identifier  IV Chromosome Location . Start  8975526
Chromosome Location . End  8984579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008274 pdzd-8 C53B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.4e C53B4.4e 3972   IV: 8975637-8975681

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4e.1 8975526 8984579 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135667   156   IV: 8975526-8975681 Caenorhabditis elegans
Exon135680   230   IV: 8975797-8976026 Caenorhabditis elegans
Exon135691   175   IV: 8976113-8976287 Caenorhabditis elegans
Exon135702   198   IV: 8976396-8976593 Caenorhabditis elegans
Exon135713   160   IV: 8976638-8976797 Caenorhabditis elegans
Exon135724   468   IV: 8977056-8977523 Caenorhabditis elegans
Exon135734   177   IV: 8977730-8977906 Caenorhabditis elegans
Exon135743   102   IV: 8978586-8978687 Caenorhabditis elegans
Exon135755   347   IV: 8980361-8980707 Caenorhabditis elegans
Exon135766   480   IV: 8980879-8981358 Caenorhabditis elegans
Exon135781   383   IV: 8981701-8982083 Caenorhabditis elegans
Exon135788   248   IV: 8982146-8982393 Caenorhabditis elegans
Exon135799   306   IV: 8982748-8983053 Caenorhabditis elegans
Exon135810   109   IV: 8983108-8983216 Caenorhabditis elegans
Exon135821   160   IV: 8983263-8983422 Caenorhabditis elegans
Exon135832   178   IV: 8983470-8983647 Caenorhabditis elegans
Exon135840   155   IV: 8983694-8983848 Caenorhabditis elegans
Exon135855   632   IV: 8983948-8984579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53B4.4e.1 8975526 8984579 1

1 Sequence

Length
4664

1 Sequence Ontology Term

Identifier Name Description
transcript