WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.5a.1 Sequence Name  D1046.5a.1
Length (nt)  1844   Chromosome Location  IV: 8956489-8965534
Chromosome . Primary Identifier  IV Chromosome Location . Start  8956489
Chromosome Location . End  8965534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008366 tpra-1 D1046.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.5a D1046.5a 1377   IV: 8956505-8956725

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D1046.5a.1 8956489 8965534 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135623   237   IV: 8956489-8956725 Caenorhabditis elegans
Exon135624   406   IV: 8956976-8957381 Caenorhabditis elegans
Exon135625   248   IV: 8957508-8957755 Caenorhabditis elegans
Exon135626   81   IV: 8957799-8957879 Caenorhabditis elegans
Exon135627   193   IV: 8957946-8958138 Caenorhabditis elegans
Exon135632   679   IV: 8964856-8965534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D1046.5a.1 8956489 8965534 1

1 Sequence

Length
1844

1 Sequence Ontology Term

Identifier Name Description
transcript