WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.6.1 Sequence Name  F08B4.6.1
Length (nt)  2749   Chromosome Location  IV: 8688276-8691513
Chromosome . Primary Identifier  IV Chromosome Location . Start  8688276
Chromosome Location . End  8691513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002028 hst-1 F08B4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.6 F08B4.6 2559   IV: 8688445-8688726

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.6.1 8688276 8691513 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134474   451   IV: 8688276-8688726 Caenorhabditis elegans
Exon134475   210   IV: 8688784-8688993 Caenorhabditis elegans
Exon134476   287   IV: 8689092-8689378 Caenorhabditis elegans
Exon134477   103   IV: 8689439-8689541 Caenorhabditis elegans
Exon134478   183   IV: 8689588-8689770 Caenorhabditis elegans
Exon134479   315   IV: 8689817-8690131 Caenorhabditis elegans
Exon134480   303   IV: 8690174-8690476 Caenorhabditis elegans
Exon134481   351   IV: 8690537-8690887 Caenorhabditis elegans
Exon134482   546   IV: 8690968-8691513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.6.1 8688276 8691513 -1

1 Sequence

Length
2749

1 Sequence Ontology Term

Identifier Name Description
transcript