WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.2b.1 Sequence Name  F08B4.2b.1
Length (nt)  4364   Chromosome Location  IV: 8669017-8676566
Chromosome . Primary Identifier  IV Chromosome Location . Start  8669017
Chromosome Location . End  8676566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.2b F08B4.2b 3921   IV: 8669142-8669216

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.2b.1 8669017 8676566 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134369   200   IV: 8669017-8669216 Caenorhabditis elegans
Exon134372   147   IV: 8669334-8669480 Caenorhabditis elegans
Exon134376   219   IV: 8669564-8669782 Caenorhabditis elegans
Exon134380   271   IV: 8669835-8670105 Caenorhabditis elegans
Exon134384   157   IV: 8670223-8670379 Caenorhabditis elegans
Exon134388   303   IV: 8670438-8670740 Caenorhabditis elegans
Exon134392   184   IV: 8670786-8670969 Caenorhabditis elegans
Exon134396   222   IV: 8671042-8671263 Caenorhabditis elegans
Exon134402   190   IV: 8672298-8672487 Caenorhabditis elegans
Exon134406   137   IV: 8672540-8672676 Caenorhabditis elegans
Exon134410   180   IV: 8672722-8672901 Caenorhabditis elegans
Exon134414   132   IV: 8672973-8673104 Caenorhabditis elegans
Exon134418   161   IV: 8673153-8673313 Caenorhabditis elegans
Exon134422   198   IV: 8673603-8673800 Caenorhabditis elegans
Exon134426   184   IV: 8673851-8674034 Caenorhabditis elegans
Exon134430   165   IV: 8674084-8674248 Caenorhabditis elegans
Exon134434   231   IV: 8674332-8674562 Caenorhabditis elegans
Exon134438   153   IV: 8674654-8674806 Caenorhabditis elegans
Exon134442   476   IV: 8675044-8675519 Caenorhabditis elegans
Exon134446   57   IV: 8675575-8675631 Caenorhabditis elegans
Exon134451   397   IV: 8676170-8676566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.2b.1 8669017 8676566 1

1 Sequence

Length
4364

1 Sequence Ontology Term

Identifier Name Description
transcript