WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.2d.1 Sequence Name  F08B4.2d.1
Length (nt)  4526   Chromosome Location  IV: 8668938-8676611
Chromosome . Primary Identifier  IV Chromosome Location . Start  8668938
Chromosome Location . End  8676611 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.2d F08B4.2d 3900   IV: 8669142-8669216

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.2d.1 8668938 8676611 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134368   279   IV: 8668938-8669216 Caenorhabditis elegans
Exon134374   147   IV: 8669334-8669480 Caenorhabditis elegans
Exon134378   219   IV: 8669564-8669782 Caenorhabditis elegans
Exon134382   271   IV: 8669835-8670105 Caenorhabditis elegans
Exon134386   157   IV: 8670223-8670379 Caenorhabditis elegans
Exon134390   303   IV: 8670438-8670740 Caenorhabditis elegans
Exon134394   184   IV: 8670786-8670969 Caenorhabditis elegans
Exon134398   222   IV: 8671042-8671263 Caenorhabditis elegans
Exon134404   190   IV: 8672298-8672487 Caenorhabditis elegans
Exon134408   137   IV: 8672540-8672676 Caenorhabditis elegans
Exon134412   180   IV: 8672722-8672901 Caenorhabditis elegans
Exon134416   132   IV: 8672973-8673104 Caenorhabditis elegans
Exon134420   161   IV: 8673153-8673313 Caenorhabditis elegans
Exon134424   198   IV: 8673603-8673800 Caenorhabditis elegans
Exon134428   184   IV: 8673851-8674034 Caenorhabditis elegans
Exon134432   165   IV: 8674084-8674248 Caenorhabditis elegans
Exon134436   231   IV: 8674332-8674562 Caenorhabditis elegans
Exon134440   153   IV: 8674654-8674806 Caenorhabditis elegans
Exon134444   476   IV: 8675044-8675519 Caenorhabditis elegans
Exon134448   57   IV: 8675575-8675631 Caenorhabditis elegans
Exon134450   38   IV: 8675741-8675778 Caenorhabditis elegans
Exon134453   442   IV: 8676170-8676611 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.2d.1 8668938 8676611 1

1 Sequence

Length
4526

1 Sequence Ontology Term

Identifier Name Description
transcript