WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.2a.1 Sequence Name  F08B4.2a.1
Length (nt)  4920   Chromosome Location  IV: 8668935-8676611
Chromosome . Primary Identifier  IV Chromosome Location . Start  8668935
Chromosome Location . End  8676611 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.2a F08B4.2a 4350   IV: 8669142-8669216

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.2a.1 8668935 8676611 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134367   282   IV: 8668935-8669216 Caenorhabditis elegans
Exon134371   147   IV: 8669334-8669480 Caenorhabditis elegans
Exon134375   219   IV: 8669564-8669782 Caenorhabditis elegans
Exon134379   271   IV: 8669835-8670105 Caenorhabditis elegans
Exon134383   157   IV: 8670223-8670379 Caenorhabditis elegans
Exon134387   303   IV: 8670438-8670740 Caenorhabditis elegans
Exon134391   184   IV: 8670786-8670969 Caenorhabditis elegans
Exon134395   222   IV: 8671042-8671263 Caenorhabditis elegans
Exon134399   429   IV: 8671575-8672003 Caenorhabditis elegans
Exon134401   190   IV: 8672298-8672487 Caenorhabditis elegans
Exon134405   137   IV: 8672540-8672676 Caenorhabditis elegans
Exon134409   180   IV: 8672722-8672901 Caenorhabditis elegans
Exon134413   132   IV: 8672973-8673104 Caenorhabditis elegans
Exon134417   161   IV: 8673153-8673313 Caenorhabditis elegans
Exon134421   198   IV: 8673603-8673800 Caenorhabditis elegans
Exon134425   184   IV: 8673851-8674034 Caenorhabditis elegans
Exon134429   165   IV: 8674084-8674248 Caenorhabditis elegans
Exon134433   231   IV: 8674332-8674562 Caenorhabditis elegans
Exon134437   153   IV: 8674654-8674806 Caenorhabditis elegans
Exon134441   476   IV: 8675044-8675519 Caenorhabditis elegans
Exon134445   57   IV: 8675575-8675631 Caenorhabditis elegans
Exon134452   442   IV: 8676170-8676611 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B4.2a.1 8668935 8676611 1

1 Sequence

Length
4920

1 Sequence Ontology Term

Identifier Name Description
transcript