WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A9.2.1 Sequence Name  F42A9.2.1
Length (nt)  3715   Chromosome Location  IV: 8620683-8626162
Chromosome . Primary Identifier  IV Chromosome Location . Start  8620683
Chromosome Location . End  8626162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003034 lin-49 F42A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A9.2 F42A9.2 3129   IV: 8620762-8620974

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42A9.2.1 8620683 8626162 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134254   292   IV: 8620683-8620974 Caenorhabditis elegans
Exon134255   125   IV: 8621025-8621149 Caenorhabditis elegans
Exon134256   199   IV: 8621463-8621661 Caenorhabditis elegans
Exon134257   650   IV: 8621737-8622386 Caenorhabditis elegans
Exon134258   310   IV: 8622717-8623026 Caenorhabditis elegans
Exon134259   199   IV: 8623147-8623345 Caenorhabditis elegans
Exon134260   795   IV: 8623582-8624376 Caenorhabditis elegans
Exon134261   352   IV: 8624462-8624813 Caenorhabditis elegans
Exon134262   252   IV: 8624965-8625216 Caenorhabditis elegans
Exon134263   541   IV: 8625622-8626162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42A9.2.1 8620683 8626162 1

1 Sequence

Length
3715

1 Sequence Ontology Term

Identifier Name Description
transcript