WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2096.4a.1 Sequence Name  D2096.4a.1
Length (nt)  1831   Chromosome Location  IV: 8361117-8363426
Chromosome . Primary Identifier  IV Chromosome Location . Start  8361117
Chromosome Location . End  8363426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2096.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005019 sqv-1 D2096.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2096.4a D2096.4a 1404   IV: 8361123-8361213

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2096.4a.1 8361117 8363426 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133571   97   IV: 8361117-8361213 Caenorhabditis elegans
Exon133572   118   IV: 8361315-8361432 Caenorhabditis elegans
Exon133574   156   IV: 8361627-8361782 Caenorhabditis elegans
Exon133576   351   IV: 8361829-8362179 Caenorhabditis elegans
Exon133578   292   IV: 8362265-8362556 Caenorhabditis elegans
Exon133581   817   IV: 8362610-8363426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2096.4a.1 8361117 8363426 1

1 Sequence

Length
1831

1 Sequence Ontology Term

Identifier Name Description
transcript