WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A12.4g.1 Sequence Name  T09A12.4g.1
Length (nt)  1974   Chromosome Location  IV: 8226743-8236050
Chromosome . Primary Identifier  IV Chromosome Location . Start  8226743
Chromosome Location . End  8236050 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A12.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003656 nhr-66 T09A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A12.4g T09A12.4g 1974   IV: 8226743-8226979

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T09A12.4g.1 8226743 8236050 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133254   237   IV: 8226743-8226979 Caenorhabditis elegans
Exon133261   274   IV: 8227030-8227303 Caenorhabditis elegans
Exon133271   320   IV: 8227670-8227989 Caenorhabditis elegans
Exon133281   353   IV: 8228039-8228391 Caenorhabditis elegans
Exon133291   72   IV: 8228447-8228518 Caenorhabditis elegans
Exon133301   151   IV: 8228785-8228935 Caenorhabditis elegans
Exon133308   68   IV: 8228995-8229062 Caenorhabditis elegans
Exon133321   84   IV: 8229249-8229332 Caenorhabditis elegans
Exon133330   314   IV: 8231523-8231836 Caenorhabditis elegans
Exon133336   85   IV: 8235825-8235909 Caenorhabditis elegans
Exon133338   16   IV: 8236035-8236050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T09A12.4g.1 8226743 8236050 -1

1 Sequence

Length
1974

1 Sequence Ontology Term

Identifier Name Description
transcript