WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A12.3a.1 Sequence Name  T09A12.3a.1
Length (nt)  2871   Chromosome Location  IV: 8213788-8220087
Chromosome . Primary Identifier  IV Chromosome Location . Start  8213788
Chromosome Location . End  8220087 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003839 ocr-2 T09A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A12.3a T09A12.3a 2703   IV: 8213905-8214135

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09A12.3a.1 8213788 8220087 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133215   348   IV: 8213788-8214135 Caenorhabditis elegans
Exon133217   132   IV: 8214192-8214323 Caenorhabditis elegans
Exon133219   117   IV: 8214370-8214486 Caenorhabditis elegans
Exon133221   150   IV: 8214929-8215078 Caenorhabditis elegans
Exon133223   414   IV: 8215156-8215569 Caenorhabditis elegans
Exon133225   108   IV: 8215640-8215747 Caenorhabditis elegans
Exon133227   68   IV: 8215792-8215859 Caenorhabditis elegans
Exon133230   212   IV: 8216248-8216459 Caenorhabditis elegans
Exon133231   83   IV: 8216654-8216736 Caenorhabditis elegans
Exon133232   409   IV: 8216782-8217190 Caenorhabditis elegans
Exon133233   521   IV: 8217260-8217780 Caenorhabditis elegans
Exon133234   130   IV: 8218891-8219020 Caenorhabditis elegans
Exon133235   179   IV: 8219909-8220087 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09A12.3a.1 8213788 8220087 -1

1 Sequence

Length
2871

1 Sequence Ontology Term

Identifier Name Description
transcript